Sphingomonas sp. S6-262

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. S6-262 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and growth in various environments. The accession number for Sphingomonas sp. S6-262 is FOCF00000000.1, which serves as a reference for genomic data and further studies. As a member of the Sphingomonas genus, this bacterium is likely to possess unique metabolic capabilities, particularly in the degradation of complex organic compounds, which is a notable trait of many Sphingomonas species. Ecologically, Sphingomonas sp. S6-262 may play a significant role in biogeochemical cycles, particularly in the breakdown of pollutants and organic material in its environment. Its motility, supported by flagella, allows it to navigate through various substrates, enhancing its interaction with the surrounding ecosystem. Overall, the traits of Sphingomonas sp. S6-262 suggest it is well-adapted to its ecological niche, contributing to nutrient cycling and potentially aiding in bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas gellani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. S6-262
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. S6-262 genome assembly, contig: Ga0075251_120,

Gene Summary

Adenine Count

634403 bp

Thymine Count

637241 bp

Guanine Count

1288613 bp

Cytosine Count

1287715 bp

Genome Length

3847972 bp

Protein-coding Genes

3594 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domainsSAMN05192583_2139Not AvailablePositive2196654 - 219782342365.9
aconitaseSAMN05192583_2140Not AvailablePositive2197958 - 220064896967.4
amino acid/polyamine/organocation transporter, apc superfamilySAMN05192583_2141Not AvailableNegative2201375 - 220282650212.6
ribosomal protein s18 acetylase rimiSAMN05192583_2142Not AvailablePositive2202883 - 220339218632.4
hypothetical proteinSAMN05192583_2143Not AvailableNegative2203405 - 220506659816.5
l-threonine ammonia-lyaseSAMN05192583_2144Not AvailablePositive2205129 - 220637043866.9
arginine-trna-protein transferaseSAMN05192583_2145Not AvailablePositive2206492 - 220727128919.5
thiol:disulfide interchange proteinSAMN05192583_2146Not AvailableNegative2207430 - 220945769352.6
predicted pyrophosphatase or phosphodiesterase, alkp superfamilySAMN05192583_2147Not AvailablePositive2209508 - 221115758766.9
right handed beta helix regionSAMN05192583_2148Not AvailableNegative2211162 - 221207632362.6

Displaying genes 2121 – 2130 of 3692 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.