Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kef-type potassium/proton antiporter, cpa2 family | SAMN05518845_102227 | Not Available | Negative | 983880 - 985865 | 71394.0 |
| arabinose-5-phosphate isomerase | SAMN05518845_102228 | Not Available | Positive | 985984 - 986985 | 34734.4 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN05518845_102229 | Not Available | Positive | 986985 - 987533 | 19742.8 |
| lipopolysaccharide export system protein lptc | SAMN05518845_102230 | Not Available | Positive | 987530 - 988192 | 24165.8 |
| short-chain dehydrogenase | SAMN05518845_102231 | Not Available | Positive | 988207 - 988992 | 27717.4 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN05518845_102232 | Not Available | Negative | 989078 - 989605 | 16168.5 |
| putative ca2+/h+ antiporter, tmem165/gdt1 family | SAMN05518845_102233 | Not Available | Positive | 990074 - 990637 | 20183.4 |
| homoserine o-acetyltransferase | SAMN05518845_102234 | Not Available | Positive | 990853 - 991977 | 41336.8 |
| methionine biosynthesis protein metw | SAMN05518845_102235 | Not Available | Positive | 991974 - 992564 | 21971.5 |
| uncharacterized protein, yigz family | SAMN05518845_102236 | Not Available | Positive | 992587 - 993174 | 20403.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
