Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05518845_10158 | Not Available | Positive | 57134 - 58483 | 49248.2 |
| diguanylate cyclase | SAMN05518845_10159 | Not Available | Negative | 58499 - 59545 | 37191.6 |
| utp--glnb (protein pii) uridylyltransferase, glnd | SAMN05518845_10160 | Not Available | Negative | 59565 - 62171 | 97978.6 |
| methionine aminopeptidase, type i | SAMN05518845_10161 | Not Available | Negative | 62194 - 63018 | 29901.9 |
| phosphoribosylformylglycinamidine synthase | SAMN05518845_10162 | Not Available | Positive | 63256 - 67224 | 141673.0 |
| peptidyl-prolyl cis-trans isomerase c | SAMN05518845_10163 | Not Available | Negative | 67332 - 68117 | 28898.9 |
| bola protein | SAMN05518845_10164 | Not Available | Negative | 68248 - 68526 | 9729.67 |
| intracellular septation protein | SAMN05518845_10165 | Not Available | Negative | 68523 - 69065 | 20347.7 |
| peptide-methionine (r)-s-oxide reductase | SAMN05518845_10166 | Not Available | Negative | 69094 - 69504 | 14869.4 |
| uncharacterized conserved protein ydiu, upf0061 family | SAMN05518845_10167 | Not Available | Negative | 69501 - 70982 | 54030.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
