Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN05518845_1205 | Not Available | Negative | 6985383 - 6986495 | 39151.1 |
| lysine-specific metallo-endopeptidase | SAMN05518845_1206 | Not Available | Positive | 6986816 - 6987805 | 35963.9 |
| ompa family protein | SAMN05518845_1207 | Not Available | Positive | 6987795 - 6988226 | 15521.7 |
| hypothetical protein | SAMN05518845_1208 | Not Available | Positive | 6988420 - 6988557 | 4568.6 |
| k+-transporting atpase atpase a chain | SAMN05518845_1209 | Not Available | Positive | 6988654 - 6990453 | 62953.9 |
| k+-transporting atpase atpase b chain | SAMN05518845_12010 | Not Available | Positive | 6990467 - 6992569 | 74022.7 |
| k+-transporting atpase atpase c chain | SAMN05518845_12011 | Not Available | Positive | 6992583 - 6993221 | 21680.8 |
| hypothetical protein | SAMN05518845_12012 | Not Available | Positive | 6993235 - 6993594 | 13146.0 |
| hypothetical protein | SAMN05518845_12013 | Not Available | Positive | 6993584 - 6993727 | 5386.82 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN05518845_12014 | Not Available | Positive | 6993741 - 6996482 | 97711.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
