Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system secreted protein vgrg | SAMN05518845_11863 | Not Available | Positive | 6599156 - 6601489 | 86209.4 |
| type vi secretion system secreted protein vgrg | SAMN05518845_11864 | Not Available | Positive | 6601529 - 6603856 | 85333.2 |
| hypothetical protein | SAMN05518845_11865 | Not Available | Positive | 6603906 - 6604340 | 15827.0 |
| pentapeptide repeat-containing protein | SAMN05518845_11866 | Not Available | Positive | 6604340 - 6607006 | 98053.6 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05518845_11867 | Not Available | Positive | 6607003 - 6608088 | 39507.4 |
| protein of unknown function | SAMN05518845_11868 | Not Available | Positive | 6608085 - 6608786 | 24901.0 |
| protein of unknown function | SAMN05518845_11869 | Not Available | Positive | 6608831 - 6609214 | 13517.7 |
| serine/threonine protein phosphatase prpc | SAMN05518845_11870 | Not Available | Negative | 6609225 - 6610040 | 29189.1 |
| fha domain protein | SAMN05518845_11871 | Not Available | Negative | 6610033 - 6612114 | 72596.5 |
| hypothetical protein | SAMN05518845_11872 | Not Available | Negative | 6612173 - 6612580 | 14847.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
