Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein cpac | SAMN05518845_117100 | Not Available | Negative | 6403389 - 6404807 | 49784.6 |
| pilus assembly protein cpab | SAMN05518845_117101 | Not Available | Negative | 6404857 - 6405852 | 34481.8 |
| prepilin peptidase cpaa | SAMN05518845_117102 | Not Available | Negative | 6405934 - 6406458 | 18491.2 |
| pilus assembly protein flp/pila | SAMN05518845_117103 | Not Available | Negative | 6406474 - 6406659 | 6328.82 |
| l,d-transpeptidase catalytic domain | SAMN05518845_117104 | Not Available | Negative | 6407357 - 6408883 | 54668.0 |
| tetratricopeptide repeat-containing protein | SAMN05518845_117105 | Not Available | Negative | 6408883 - 6409980 | 38567.8 |
| transcriptional regulator, lysr family | SAMN05518845_117106 | Not Available | Positive | 6410055 - 6411101 | 38386.4 |
| hypothetical protein | SAMN05518845_117107 | Not Available | Positive | 6411356 - 6411886 | 19622.3 |
| hypothetical protein | SAMN05518845_117108 | Not Available | Positive | 6411916 - 6412923 | 37789.4 |
| aldehyde dehydrogenase (acceptor) | SAMN05518845_117109 | Not Available | Positive | 6413036 - 6414544 | 54104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
