Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactarate dehydratase /l-talarate dehydratase | SAMN05518845_115146 | Not Available | Positive | 5972979 - 5974109 | 41290.4 |
| galactarate dehydratase | SAMN05518845_115147 | Not Available | Positive | 5974146 - 5975723 | 56427.0 |
| transcriptional regulator, laci family | SAMN05518845_115148 | Not Available | Negative | 5976585 - 5977589 | 35401.8 |
| glutathione s-transferase | SAMN05518845_115149 | Not Available | Negative | 5978095 - 5978583 | 17868.2 |
| hypothetical protein | SAMN05518845_115150 | Not Available | Negative | 5979299 - 5980429 | 40155.8 |
| acetyl-coa c-acetyltransferase | SAMN05518845_115151 | Not Available | Negative | 5980434 - 5981618 | 40978.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05518845_115152 | Not Available | Negative | 5981688 - 5982446 | 25833.5 |
| hydroxymethylglutaryl-coa lyase | SAMN05518845_115153 | Not Available | Negative | 5982500 - 5983429 | 33032.5 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05518845_115154 | Not Available | Negative | 5983446 - 5984066 | 23355.9 |
| 3-isopropylmalate dehydratase, large subunit | SAMN05518845_115155 | Not Available | Negative | 5984063 - 5985475 | 50184.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
