Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN05518845_11393 | Not Available | Positive | 5392347 - 5392958 | 22600.3 |
| putative acetyltransferase | SAMN05518845_11394 | Not Available | Positive | 5392955 - 5393446 | 18147.8 |
| hypothetical protein | SAMN05518845_11395 | Not Available | Positive | 5393478 - 5393759 | 10068.9 |
| trna (cmo5u34)-methyltransferase | SAMN05518845_11396 | Not Available | Positive | 5393815 - 5394504 | 24811.6 |
| uncharacterized conserved protein | SAMN05518845_11397 | Not Available | Positive | 5394582 - 5394983 | 14585.2 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05518845_11398 | Not Available | Positive | 5395039 - 5395665 | 21990.4 |
| hypothetical protein | SAMN05518845_11399 | Not Available | Negative | 5395767 - 5395979 | 7963.25 |
| penicillin-binding protein 1c | SAMN05518845_113100 | Not Available | Positive | 5396259 - 5398520 | 81791.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05518845_113101 | Not Available | Negative | 5398536 - 5399429 | 32681.7 |
| dna-binding transcriptional regulator, fadr family | SAMN05518845_113102 | Not Available | Positive | 5399779 - 5400459 | 24214.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
