Variovorax sp. YR750

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. YR750 is a rod-shaped bacterium characterized by a single replicon. This organism is part of the Variovorax genus, which is known for its diverse metabolic capabilities and ecological versatility. The specific accession number for Variovorax sp. YR750 is FOBJ00000000.1, which provides a reference point for genomic studies and further research into its properties. The rod shape of Variovorax sp. YR750 may influence its mobility and interaction with its environment, particularly in soil or aquatic ecosystems where such morphologies can enhance nutrient uptake and colonization efficiency. The presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for adaptation to specific ecological niches. In the context of microbial ecology, Variovorax species are often involved in the degradation of various organic compounds, including pollutants. Their ability to metabolize different substrates can play a crucial role in bioremediation efforts, making them significant in the context of environmental sustainability. Understanding the traits of Variovorax sp. YR750, including its morphology and genomic structure, can provide insights into its potential applications in biotechnology and its role in nutrient cycling within ecosystems. The study of this bacterium may offer further understanding of microbial interactions and the ecological balance in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. YR750
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. YR750 genome assembly, contig: Ga0115525_158, whole

Gene Summary

Adenine Count

1320280 bp

Thymine Count

1317919 bp

Guanine Count

2724946 bp

Cytosine Count

2735970 bp

Genome Length

8099414 bp

Protein-coding Genes

7420 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized conserved protein, duf1330 familySAMN05518845_112148Not AvailableNegative5164513 - 516481211145.3
alkylhydroperoxidase family enzyme, contains cxxc motifSAMN05518845_112149Not AvailableNegative5164868 - 516544021452.8
transcriptional regulator, hxlr familySAMN05518845_112150Not AvailablePositive5165570 - 516588711784.2
transporter, cpa2 familySAMN05518845_112151Not AvailablePositive5165924 - 516718043374.0
two-component system, ompr family, heavy metal sensor histidine kinase cussSAMN05518845_112152Not AvailableNegative5167187 - 516850948081.8
two-component system, ompr family, copper resistance phosphate regulon response regulator cusrSAMN05518845_112153Not AvailableNegative5168511 - 516918825654.3
hypothetical proteinSAMN05518845_112154Not AvailablePositive5169350 - 516972413920.0
outer membrane protein, cobalt-zinc-cadmium efflux systemSAMN05518845_112155Not AvailablePositive5169824 - 517118247887.8
membrane fusion protein, cobalt-zinc-cadmium efflux systemSAMN05518845_112156Not AvailablePositive5171214 - 517259348842.4
cobalt-zinc-cadmium resistance protein czcaSAMN05518845_112157Not AvailablePositive5172604 - 5175831116223.0

Displaying genes 4791 – 4800 of 7483 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.