Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase a | SAMN05518845_111206 | Not Available | Positive | 4930591 - 4932234 | 57610.9 |
| hypothetical protein | SAMN05518845_111207 | Not Available | Positive | 4932401 - 4933150 | 27293.5 |
| hypothetical protein | SAMN05518845_111208 | Not Available | Positive | 4933178 - 4934362 | 41344.3 |
| caspase domain-containing protein | SAMN05518845_111209 | Not Available | Positive | 4934416 - 4936503 | 74625.3 |
| type vi protein secretion system component hcp (secreted cytotoxin) | SAMN05518845_111210 | Not Available | Positive | 4936561 - 4937118 | 20246.9 |
| type vi secretion system protein impe | SAMN05518845_111211 | Not Available | Positive | 4937156 - 4937995 | 30811.6 |
| type vi secretion system protein impf | SAMN05518845_111212 | Not Available | Positive | 4937988 - 4938503 | 19395.4 |
| type vi secretion system protein impg | SAMN05518845_111213 | Not Available | Positive | 4938511 - 4940403 | 69411.6 |
| type vi secretion system protein imph | SAMN05518845_111214 | Not Available | Positive | 4940379 - 4941503 | 42179.2 |
| type vi secretion system protein vasg | SAMN05518845_111215 | Not Available | Positive | 4941500 - 4944214 | 98524.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
