Variovorax sp. YR750

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. YR750 is a rod-shaped bacterium characterized by a single replicon. This organism is part of the Variovorax genus, which is known for its diverse metabolic capabilities and ecological versatility. The specific accession number for Variovorax sp. YR750 is FOBJ00000000.1, which provides a reference point for genomic studies and further research into its properties. The rod shape of Variovorax sp. YR750 may influence its mobility and interaction with its environment, particularly in soil or aquatic ecosystems where such morphologies can enhance nutrient uptake and colonization efficiency. The presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for adaptation to specific ecological niches. In the context of microbial ecology, Variovorax species are often involved in the degradation of various organic compounds, including pollutants. Their ability to metabolize different substrates can play a crucial role in bioremediation efforts, making them significant in the context of environmental sustainability. Understanding the traits of Variovorax sp. YR750, including its morphology and genomic structure, can provide insights into its potential applications in biotechnology and its role in nutrient cycling within ecosystems. The study of this bacterium may offer further understanding of microbial interactions and the ecological balance in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. YR750
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. YR750 genome assembly, contig: Ga0115525_158, whole

Gene Summary

Adenine Count

1320280 bp

Thymine Count

1317919 bp

Guanine Count

2724946 bp

Cytosine Count

2735970 bp

Genome Length

8099414 bp

Protein-coding Genes

7420 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-carboxy-4-hydroxy-2-oxoadipate aldolaseSAMN05518845_108285Not AvailablePositive4002868 - 400356924373.6
mfs transporter, aahs family, 4-hydroxybenzoate transporterSAMN05518845_108286Not AvailablePositive4003609 - 400496446745.6
protocatechuate 4,5-dioxygenase alpha subunit /protocatechuate 4,5-dioxygenase beta subunitSAMN05518845_108287Not AvailablePositive4005038 - 400634248036.2
tripartite-type tricarboxylate transporter, receptor component tctcSAMN05518845_108288Not AvailablePositive4006379 - 400736533891.4
tripartite-type tricarboxylate transporter, receptor component tctcSAMN05518845_108289Not AvailablePositive4007377 - 400836934481.9
l-ascorbate metabolism protein ulag, beta-lactamase superfamilySAMN05518845_108290Not AvailablePositive4008393 - 400924130251.9
3-hydroxyisobutyrate dehydrogenaseSAMN05518845_108291Not AvailablePositive4009261 - 401015131263.4
molybdate transport system substrate-binding proteinSAMN05518845_108292Not AvailablePositive4010184 - 401084322081.5
dna-binding transcriptional regulator, lysr familySAMN05518845_108293Not AvailableNegative4010840 - 401175733072.5
citrate lyase subunit beta / citryl-coa lyaseSAMN05518845_108294Not AvailablePositive4011835 - 401270430956.2

Displaying genes 3711 – 3720 of 7483 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.