Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein | SAMN05518845_101348 | Not Available | Positive | 396134 - 397831 | 61460.9 |
| peptide/nickel transport system substrate-binding protein | SAMN05518845_101349 | Not Available | Positive | 397867 - 399435 | 56908.7 |
| protein of unknown function | SAMN05518845_101350 | Not Available | Negative | 399447 - 400037 | 21214.3 |
| alkylated dna repair dioxygenase alkb | SAMN05518845_101351 | Not Available | Negative | 400034 - 400654 | 23240.9 |
| glycosyl hydrolases family 16 | SAMN05518845_101352 | Not Available | Negative | 400682 - 401518 | 30482.4 |
| dna excision repair protein ercc-2 | SAMN05518845_101353 | Not Available | Negative | 402111 - 404435 | 86397.3 |
| signal transduction histidine kinase | SAMN05518845_101354 | Not Available | Positive | 404591 - 408097 | 129090.0 |
| mcp methyltransferase, cher-type | SAMN05518845_101355 | Not Available | Positive | 408094 - 408972 | 32933.4 |
| two-component system, chemotaxis family, response regulator cheb | SAMN05518845_101356 | Not Available | Positive | 408969 - 409586 | 22306.1 |
| signal transduction histidine kinase | SAMN05518845_101357 | Not Available | Positive | 409576 - 410799 | 45131.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
