Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid dehydrogenase | SAMN05518845_105385 | Not Available | Positive | 2946416 - 2947726 | 46025.2 |
| transcriptional regulator, lysr family | SAMN05518845_105386 | Not Available | Negative | 2947734 - 2948630 | 31648.2 |
| 2-methylisocitrate lyase, pep mutase family | SAMN05518845_105387 | Not Available | Positive | 2948741 - 2949652 | 31600.6 |
| cu and ag efflux protein cusf | SAMN05518845_105388 | Not Available | Negative | 2949621 - 2949911 | 10064.4 |
| uncharacterized conserved protein | SAMN05518845_105389 | Not Available | Negative | 2949950 - 2950405 | 16184.7 |
| uncharacterized copper-binding protein, cupredoxin-like subfamily | SAMN05518845_105390 | Not Available | Negative | 2950417 - 2950935 | 18700.8 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN05518845_105391 | Not Available | Negative | 2950975 - 2952363 | 50827.1 |
| outer membrane protein tolc | SAMN05518845_105392 | Not Available | Negative | 2952365 - 2953879 | 54075.3 |
| hypothetical protein | SAMN05518845_105393 | Not Available | Negative | 2953957 - 2954385 | 14619.6 |
| hypothetical protein | SAMN05518845_105394 | Not Available | Negative | 2954410 - 2954685 | 9823.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
