Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | SAMN05518845_105215 | Not Available | Negative | 2743716 - 2745029 | 47209.5 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05518845_105216 | Not Available | Negative | 2745069 - 2745602 | 19598.1 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05518845_105217 | Not Available | Negative | 2745692 - 2746660 | 34736.6 |
| competence protein comea | SAMN05518845_105218 | Not Available | Negative | 2746816 - 2747145 | 11518.0 |
| lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domain | SAMN05518845_105219 | Not Available | Negative | 2747285 - 2748454 | 43667.4 |
| uncharacterized integral membrane protein | SAMN05518845_105220 | Not Available | Negative | 2748444 - 2748782 | 11808.4 |
| integration host factor subunit beta | SAMN05518845_105221 | Not Available | Negative | 2748851 - 2749189 | 12395.8 |
| ssu ribosomal protein s1p | SAMN05518845_105222 | Not Available | Negative | 2749268 - 2750956 | 61809.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05518845_105223 | Not Available | Negative | 2751197 - 2753209 | 71726.1 |
| prephenate dehydrogenase | SAMN05518845_105224 | Not Available | Negative | 2753211 - 2754101 | 31443.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
