Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05518845_101218 | Not Available | Positive | 243268 - 244164 | 31271.4 |
| penicillin binding protein transpeptidase domain-containing protein | SAMN05518845_101219 | Not Available | Positive | 244274 - 247273 | 110777.0 |
| hypothetical protein | SAMN05518845_101220 | Not Available | Positive | 247415 - 248317 | 32799.3 |
| peptide/nickel transport system atp-binding protein | SAMN05518845_101221 | Not Available | Negative | 248346 - 250076 | 62877.3 |
| peptide/nickel transport system permease protein | SAMN05518845_101222 | Not Available | Negative | 250078 - 251037 | 33452.5 |
| peptide/nickel transport system permease protein | SAMN05518845_101223 | Not Available | Negative | 251072 - 252055 | 35241.8 |
| peptide/nickel transport system substrate-binding protein | SAMN05518845_101224 | Not Available | Positive | 252215 - 253795 | 58900.9 |
| hypothetical protein | SAMN05518845_101225 | Not Available | Positive | 253826 - 254206 | 14286.7 |
| hypothetical protein | SAMN05518845_101226 | Not Available | Negative | 254223 - 255914 | 62230.4 |
| biotin carboxylase | SAMN05518845_101227 | Not Available | Negative | 255911 - 257176 | 46736.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
