Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05518845_10458 | Not Available | Positive | 2032527 - 2033909 | 49948.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518845_10459 | Not Available | Positive | 2033950 - 2034939 | 34633.1 |
| fumarase, class ii | SAMN05518845_10460 | Not Available | Positive | 2034944 - 2036338 | 49319.4 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05518845_10461 | Not Available | Negative | 2036352 - 2036912 | 20566.0 |
| hypothetical protein | SAMN05518845_10462 | Not Available | Positive | 2037474 - 2041154 | 125286.0 |
| atp-binding cassette, subfamily c, exporter for protease/lipase | SAMN05518845_10463 | Not Available | Positive | 2041243 - 2043036 | 63801.2 |
| atp-binding cassette, subfamily c, exporter for protease/lipase | SAMN05518845_10464 | Not Available | Positive | 2043033 - 2044757 | 61459.2 |
| membrane fusion protein, protease secretion system | SAMN05518845_10465 | Not Available | Positive | 2044802 - 2046169 | 49884.1 |
| outer membrane protein/outer membrane protein, protease secretion system | SAMN05518845_10466 | Not Available | Positive | 2046173 - 2047501 | 49386.5 |
| choline dehydrogenase | SAMN05518845_10467 | Not Available | Negative | 2047536 - 2053184 | 202457.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
