Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ydga, duf945 family | SAMN05518845_103448 | Not Available | Positive | 1868504 - 1870006 | 52489.6 |
| gtpase, g3e family | SAMN05518845_103449 | Not Available | Negative | 1870086 - 1871138 | 39422.9 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05518845_103450 | Not Available | Negative | 1871249 - 1872463 | 43848.5 |
| integrase/recombinase xerc | SAMN05518845_103451 | Not Available | Negative | 1872477 - 1873484 | 37040.4 |
| protein sana, affects membrane permeability for vancomycin | SAMN05518845_103452 | Not Available | Negative | 1873459 - 1874094 | 22866.8 |
| hypothetical protein | SAMN05518845_103453 | Not Available | Negative | 1874091 - 1874795 | 26075.9 |
| diaminopimelate epimerase | SAMN05518845_103454 | Not Available | Negative | 1874792 - 1875706 | 32684.1 |
| hypothetical protein | SAMN05518845_103455 | Not Available | Negative | 1875748 - 1876062 | 11231.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05518845_103456 | Not Available | Negative | 1876123 - 1876944 | 29819.5 |
| predicted arabinose efflux permease, mfs family | SAMN05518845_103457 | Not Available | Negative | 1877047 - 1878648 | 56666.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
