Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein e (gspe) | SAMN05518845_103278 | Not Available | Positive | 1667086 - 1668477 | 50205.3 |
| general secretion pathway protein f | SAMN05518845_103279 | Not Available | Positive | 1668496 - 1669734 | 43652.9 |
| 5'-nucleotidase | SAMN05518845_103280 | Not Available | Positive | 1669769 - 1670668 | 33195.8 |
| hypothetical protein | SAMN05518845_103281 | Not Available | Positive | 1670783 - 1670968 | 5978.34 |
| phospholipase c | SAMN05518845_103282 | Not Available | Positive | 1671002 - 1673248 | 82103.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05518845_103283 | Not Available | Positive | 1673296 - 1674198 | 32164.2 |
| nucleobase:cation symporter-2, ncs2 family | SAMN05518845_103284 | Not Available | Positive | 1674320 - 1675735 | 48542.7 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase/8-oxoguanine deaminase | SAMN05518845_103285 | Not Available | Positive | 1675722 - 1677167 | 51574.8 |
| lipoxygenase | SAMN05518845_103286 | Not Available | Positive | 1677345 - 1679354 | 71761.2 |
| cytochrome c, mono-and diheme variants | SAMN05518845_103287 | Not Available | Negative | 1679356 - 1680645 | 45617.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
