Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| salicylate 5-hydroxylase small subunit | SAMN05518845_103178 | Not Available | Positive | 1569995 - 1570465 | 18242.5 |
| naphthalene 1,2-dioxygenase system ferredoxin subunit | SAMN05518845_103179 | Not Available | Positive | 1570482 - 1570808 | 11568.4 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05518845_103180 | Not Available | Positive | 1570826 - 1572052 | 43687.2 |
| protein of unknown function | SAMN05518845_103181 | Not Available | Negative | 1572110 - 1572361 | 9057.68 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05518845_103182 | Not Available | Negative | 1572358 - 1573227 | 31321.4 |
| transcriptional regulator, lysr family | SAMN05518845_103183 | Not Available | Positive | 1573354 - 1574253 | 32619.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05518845_103184 | Not Available | Negative | 1574272 - 1575234 | 35423.8 |
| 2,5-diketo-d-gluconate reductase a | SAMN05518845_103185 | Not Available | Positive | 1575360 - 1576211 | 31955.2 |
| major facilitator superfamily protein | SAMN05518845_103186 | Not Available | Positive | 1576221 - 1576952 | 24907.7 |
| major facilitator superfamily protein | SAMN05518845_103187 | Not Available | Positive | 1576952 - 1577659 | 24578.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
