Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR750 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320280 bp
Thymine Count
1317919 bp
Guanine Count
2724946 bp
Cytosine Count
2735970 bp
Genome Length
8099414 bp
Protein-coding Genes
7420 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dgtpase | SAMN05518845_103148 | Not Available | Negative | 1535763 - 1536893 | 42408.1 |
| 3-dehydroquinate synthase | SAMN05518845_103149 | Not Available | Negative | 1536893 - 1538005 | 39252.7 |
| shikimate kinase | SAMN05518845_103150 | Not Available | Negative | 1538041 - 1538526 | 18221.8 |
| type iv pilus assembly protein pilq | SAMN05518845_103151 | Not Available | Negative | 1538613 - 1540763 | 76149.9 |
| type iv pilus assembly protein pilp | SAMN05518845_103152 | Not Available | Negative | 1540760 - 1541299 | 20058.2 |
| type iv pilus assembly protein pilo | SAMN05518845_103153 | Not Available | Negative | 1541296 - 1541973 | 25116.0 |
| type iv pilus assembly protein piln | SAMN05518845_103154 | Not Available | Negative | 1541980 - 1542600 | 22934.7 |
| type iv pilus assembly protein pilm | SAMN05518845_103155 | Not Available | Negative | 1542597 - 1543676 | 39028.8 |
| penicillin-binding protein 1a | SAMN05518845_103156 | Not Available | Positive | 1543918 - 1546326 | 87743.2 |
| cyay protein | SAMN05518845_103157 | Not Available | Negative | 1546357 - 1546689 | 12107.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
