Pseudoxanthomonas sp. GM95

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Pseudoxanthomonas

Description

Pseudoxanthomonas sp. GM95 is a rod-shaped bacterium characterized by a single replicon, indicating a streamlined genetic structure. The strain is identified by the accession number FOAX00000000.1, which can be used for reference in genomic databases. The rod shape of Pseudoxanthomonas sp. GM95 suggests an adaptation that may be beneficial for its ecological niche, potentially allowing for efficient movement through various environments, such as soil or aquatic systems. The single replicon may also imply a simpler regulatory mechanism for gene expression and replication, which could enhance its adaptability to varying environmental conditions. Understanding the traits of Pseudoxanthomonas sp. GM95 contributes to the broader knowledge of the Pseudoxanthomonas genus, which is known for its diverse metabolic capabilities. This specific strain may play a role in nutrient cycling or other ecological processes, although further research would be necessary to establish its precise ecological contributions. In summary, Pseudoxanthomonas sp. GM95 is a rod-shaped bacterium with a single replicon, as indicated by its accession number FOAX00000000.1. Its morphological and genetic characteristics may provide insights into its ecological functions and adaptability in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusPseudoxanthomonas
SpeciesPseudoxanthomonas sp. GM95
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoxanthomonas sp. GM95 genome assembly, contig: Ga0115496_110,

Gene Summary

Adenine Count

780687 bp

Thymine Count

788930 bp

Guanine Count

1581663 bp

Cytosine Count

1543828 bp

Genome Length

4695108 bp

Protein-coding Genes

4072 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
upf0042 nucleotide-binding proteinSAMN05428989_2434Not AvailableNegative2713621 - 271452934064.4
hpr(ser) kinase/phosphataseSAMN05428989_2435Not AvailableNegative2714526 - 271547635069.5
ssu ribosomal protein s30p /sigma 54 modulation proteinSAMN05428989_2436Not AvailableNegative2715619 - 271593612080.5
rna polymerase, sigma 54 subunit, rpon/siglSAMN05428989_2437Not AvailableNegative2716104 - 271755853173.9
lipopolysaccharide export system atp-binding proteinSAMN05428989_2438Not AvailableNegative2717609 - 271832825910.4
lipopolysaccharide export system protein lptaSAMN05428989_2439Not AvailableNegative2718328 - 271888819417.8
lipopolysaccharide export system protein lptcSAMN05428989_2440Not AvailableNegative2718866 - 271942920578.4
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)SAMN05428989_2441Not AvailableNegative2719426 - 271997419293.1
arabinose-5-phosphate isomeraseSAMN05428989_2442Not AvailableNegative2720023 - 272103034324.3
acid stress-induced bola-like protein ibag/yrba, predicted regulator of iron metabolismSAMN05428989_2443Not AvailablePositive2721084 - 27213148054.68

Displaying genes 2421 – 2430 of 4127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.