Pseudoxanthomonas sp. GM95

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Pseudoxanthomonas

Description

Pseudoxanthomonas sp. GM95 is a rod-shaped bacterium characterized by a single replicon, indicating a streamlined genetic structure. The strain is identified by the accession number FOAX00000000.1, which can be used for reference in genomic databases. The rod shape of Pseudoxanthomonas sp. GM95 suggests an adaptation that may be beneficial for its ecological niche, potentially allowing for efficient movement through various environments, such as soil or aquatic systems. The single replicon may also imply a simpler regulatory mechanism for gene expression and replication, which could enhance its adaptability to varying environmental conditions. Understanding the traits of Pseudoxanthomonas sp. GM95 contributes to the broader knowledge of the Pseudoxanthomonas genus, which is known for its diverse metabolic capabilities. This specific strain may play a role in nutrient cycling or other ecological processes, although further research would be necessary to establish its precise ecological contributions. In summary, Pseudoxanthomonas sp. GM95 is a rod-shaped bacterium with a single replicon, as indicated by its accession number FOAX00000000.1. Its morphological and genetic characteristics may provide insights into its ecological functions and adaptability in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusPseudoxanthomonas
SpeciesPseudoxanthomonas sp. GM95
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoxanthomonas sp. GM95 genome assembly, contig: Ga0115496_110,

Gene Summary

Adenine Count

780687 bp

Thymine Count

788930 bp

Guanine Count

1581663 bp

Cytosine Count

1543828 bp

Genome Length

4695108 bp

Protein-coding Genes

4072 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine dehydrogenaseSAMN05428989_2050Not AvailablePositive2254892 - 225688070919.8
hypothetical proteinSAMN05428989_2051Not AvailableNegative2256974 - 225752519621.2
hypothetical proteinSAMN05428989_2052Not AvailableNegative2257736 - 225832320950.9
d-amino-acid dehydrogenaseSAMN05428989_2053Not AvailablePositive2258681 - 225999447184.6
alanine racemaseSAMN05428989_2054Not AvailablePositive2259973 - 226110039830.0
succinate semialdehyde dehydrogenaseSAMN05428989_2055Not AvailablePositive2261300 - 226278152071.2
tartrate dehydrogenase/decarboxylase / d-malate dehydrogenaseSAMN05428989_2056Not AvailablePositive2262778 - 226385438665.4
amino acid/polyamine/organocation transporter, apc superfamilySAMN05428989_2057Not AvailablePositive2263916 - 226534349350.3
iron complex outermembrane recepter proteinSAMN05428989_2058Not AvailablePositive2265966 - 226856393316.4
sugar lactone lactonase yvreSAMN05428989_2059Not AvailablePositive2268569 - 226951933502.6

Displaying genes 2041 – 2050 of 4127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.