Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Alloboseaceae
Genus
Allobosea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Alloboseaceae |
| Genus | Allobosea |
| Species | Allobosea lupini |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1024832 bp
Thymine Count
1017719 bp
Guanine Count
2040437 bp
Cytosine Count
2045088 bp
Genome Length
6128076 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, murr/rpir family, contains hth and sis domains | SAMN04515666_11554 | Not Available | Positive | 5801627 - 5802469 | 30537.6 |
| hypothetical protein | SAMN04515666_11555 | Not Available | Positive | 5802632 - 5803669 | 37754.6 |
| putative spermidine/putrescine transport system permease protein | SAMN04515666_11556 | Not Available | Positive | 5803666 - 5804607 | 33596.9 |
| putative spermidine/putrescine transport system permease protein | SAMN04515666_11557 | Not Available | Positive | 5804604 - 5805410 | 28991.5 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN04515666_11558 | Not Available | Positive | 5805452 - 5806531 | 39423.7 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN04515666_11559 | Not Available | Positive | 5806528 - 5807631 | 39332.4 |
| 4-carboxymuconolactone decarboxylase | SAMN04515666_11560 | Not Available | Negative | 5808092 - 5808853 | 27150.6 |
| cupin domain protein | SAMN04515666_11561 | Not Available | Negative | 5809023 - 5809487 | 16369.4 |
| hypothetical protein | SAMN04515666_11562 | Not Available | Negative | 5809698 - 5810192 | 17437.7 |
| hypothetical protein | SAMN04515666_11563 | Not Available | Negative | 5810209 - 5810823 | 21910.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
