Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Alloboseaceae
Genus
Allobosea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Alloboseaceae |
| Genus | Allobosea |
| Species | Allobosea lupini |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1024832 bp
Thymine Count
1017719 bp
Guanine Count
2040437 bp
Cytosine Count
2045088 bp
Genome Length
6128076 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04515666_107200 | Not Available | Positive | 4452937 - 4454187 | 44161.8 |
| hypothetical protein | SAMN04515666_107201 | Not Available | Positive | 4454269 - 4456254 | 70912.6 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN04515666_107202 | Not Available | Negative | 4456258 - 4456857 | 21963.0 |
| outer membrane immunogenic protein | SAMN04515666_107203 | Not Available | Positive | 4457034 - 4457816 | 27745.8 |
| formate-tetrahydrofolate ligase | SAMN04515666_107204 | Not Available | Positive | 4457971 - 4459644 | 58650.7 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04515666_107205 | Not Available | Positive | 4459890 - 4461665 | 65144.7 |
| l-idonate 5-dehydrogenase | SAMN04515666_107206 | Not Available | Negative | 4461782 - 4462816 | 36385.4 |
| gluconate 5-dehydrogenase | SAMN04515666_107207 | Not Available | Positive | 4462938 - 4463705 | 26578.1 |
| glutathione s-transferase | SAMN04515666_107208 | Not Available | Negative | 4463829 - 4464515 | 25903.0 |
| 2-haloacid dehalogenase | SAMN04515666_107209 | Not Available | Negative | 4464539 - 4465282 | 27027.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
