Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Alloboseaceae
Genus
Allobosea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Alloboseaceae |
| Genus | Allobosea |
| Species | Allobosea lupini |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1024832 bp
Thymine Count
1017719 bp
Guanine Count
2040437 bp
Cytosine Count
2045088 bp
Genome Length
6128076 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04515666_10769 | Not Available | Positive | 4323980 - 4324978 | 36504.6 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04515666_10770 | Not Available | Negative | 4324973 - 4326289 | 45993.4 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN04515666_10771 | Not Available | Positive | 4326648 - 4328081 | 51104.3 |
| o-antigen ligase | SAMN04515666_10772 | Not Available | Positive | 4328078 - 4329403 | 47599.1 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04515666_10773 | Not Available | Positive | 4329396 - 4330211 | 29877.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04515666_10774 | Not Available | Positive | 4330208 - 4331434 | 44496.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04515666_10775 | Not Available | Positive | 4331434 - 4332648 | 43789.1 |
| methyltransferase domain-containing protein | SAMN04515666_10776 | Not Available | Positive | 4332648 - 4333553 | 33158.4 |
| cellulase (glycosyl hydrolase family 5) | SAMN04515666_10777 | Not Available | Positive | 4333550 - 4334785 | 44024.7 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04515666_10778 | Not Available | Positive | 4334794 - 4336281 | 53734.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
