Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Alloboseaceae
Genus
Allobosea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Alloboseaceae |
| Genus | Allobosea |
| Species | Allobosea lupini |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1024832 bp
Thymine Count
1017719 bp
Guanine Count
2040437 bp
Cytosine Count
2045088 bp
Genome Length
6128076 bp
Protein-coding Genes
5876 genes
Non-Coding Genes
99 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN04515666_10739 | Not Available | Negative | 4289730 - 4290980 | 43927.3 |
| hypothetical protein | SAMN04515666_10740 | Not Available | Positive | 4291211 - 4291849 | 22780.2 |
| hypothetical protein | SAMN04515666_10741 | Not Available | Negative | 4291862 - 4292401 | 19772.2 |
| shikimate dehydrogenase | SAMN04515666_10742 | Not Available | Negative | 4292461 - 4293291 | 28965.1 |
| uncharacterized conserved protein, duf849 family | SAMN04515666_10743 | Not Available | Negative | 4293335 - 4294183 | 30630.7 |
| protocatechuate 3,4-dioxygenase, alpha subunit | SAMN04515666_10744 | Not Available | Negative | 4294187 - 4294798 | 22451.6 |
| protocatechuate 3,4-dioxygenase, beta subunit | SAMN04515666_10745 | Not Available | Negative | 4294801 - 4295523 | 26904.1 |
| 4-carboxymuconolactone decarboxylase | SAMN04515666_10746 | Not Available | Negative | 4295542 - 4295928 | 13999.8 |
| 3-oxoadipate enol-lactonase | SAMN04515666_10747 | Not Available | Negative | 4295921 - 4296706 | 27470.0 |
| lysr family transcriptional regulator, pca operon transcriptional activator | SAMN04515666_10748 | Not Available | Positive | 4296784 - 4297692 | 32543.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
