Pseudosphingobacterium domesticum strain DSM 18733

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Olivibacter

Description

Pseudosphingobacterium domesticum strain DSM 18733 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number FOAF00000000.1, facilitating its identification and study in microbiological research. As a member of the Pseudosphingobacterium genus, DSM 18733 contributes to the broader understanding of microbial diversity and functional capabilities within its ecological niches. While specific metabolic pathways or ecological roles of this strain are not detailed in the provided traits, the presence of a single replicon may suggest potential advantages in genomic stability and adaptability to various environments. In summary, Pseudosphingobacterium domesticum strain DSM 18733, with its single replicon and specific genomic identification, underscores the importance of microbial strains in understanding ecological interactions and evolutionary adaptations in their respective habitats. Further exploration of its physiological properties and interactions could provide deeper insights into its role in the environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusOlivibacter
SpeciesOlivibacter domesticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudosphingobacterium domesticum strain DSM 18733 genome

Gene Summary

Adenine Count

2060102 bp

Thymine Count

2079423 bp

Guanine Count

1274645 bp

Cytosine Count

1365528 bp

Genome Length

6780495 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
subtilase family proteinSAMN05661044_05392Not AvailablePositive6472528 - 647413860036.4
hypothetical proteinSAMN05661044_05393Not AvailablePositive6474219 - 64744227742.98
dna-(apurinic or apyrimidinic site) lyase /endonuclease iiiSAMN05661044_05394Not AvailablePositive6474513 - 647519025588.1
recombination protein recaSAMN05661044_05395Not AvailablePositive6475248 - 647624335617.1
hypothetical proteinSAMN05661044_05396Not AvailableNegative6476291 - 64764947535.63
n6-l-threonylcarbamoyladenine synthaseSAMN05661044_05397Not AvailableNegative6476507 - 647752637022.8
family of unknown functionSAMN05661044_05398Not AvailablePositive6477584 - 6481969162275.0
3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase iiSAMN05661044_05399Not AvailableNegative6482019 - 648323344451.5
lipopolysaccharide export system permease proteinSAMN05661044_05400Not AvailableNegative6483308 - 648478656176.4
hypothetical proteinSAMN05661044_05401Not AvailableNegative6484873 - 648525314820.4

Displaying genes 5381 – 5390 of 5647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.