Pseudosphingobacterium domesticum strain DSM 18733

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Olivibacter

Description

Pseudosphingobacterium domesticum strain DSM 18733 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number FOAF00000000.1, facilitating its identification and study in microbiological research. As a member of the Pseudosphingobacterium genus, DSM 18733 contributes to the broader understanding of microbial diversity and functional capabilities within its ecological niches. While specific metabolic pathways or ecological roles of this strain are not detailed in the provided traits, the presence of a single replicon may suggest potential advantages in genomic stability and adaptability to various environments. In summary, Pseudosphingobacterium domesticum strain DSM 18733, with its single replicon and specific genomic identification, underscores the importance of microbial strains in understanding ecological interactions and evolutionary adaptations in their respective habitats. Further exploration of its physiological properties and interactions could provide deeper insights into its role in the environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusOlivibacter
SpeciesOlivibacter domesticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudosphingobacterium domesticum strain DSM 18733 genome

Gene Summary

Adenine Count

2060102 bp

Thymine Count

2079423 bp

Guanine Count

1274645 bp

Cytosine Count

1365528 bp

Genome Length

6780495 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05661044_04820Not AvailablePositive5753702 - 575441227587.1
dipeptidyl-peptidase-3SAMN05661044_04821Not AvailablePositive5754524 - 575657878053.6
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or edSAMN05661044_04822Not AvailablePositive5756883 - 575753924917.8
hypothetical proteinSAMN05661044_04823Not AvailableNegative5757554 - 575813521355.2
oligoendopeptidase fSAMN05661044_04824Not AvailableNegative5758147 - 575985666507.3
4-hydroxybenzoate polyprenyltransferaseSAMN05661044_04825Not AvailableNegative5760209 - 576106332288.4
gtp-binding proteinSAMN05661044_04826Not AvailableNegative5761071 - 576168223308.4
demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseSAMN05661044_04827Not AvailablePositive5761856 - 576259027076.1
hypothetical proteinSAMN05661044_04828Not AvailablePositive5762587 - 576341431261.7
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN05661044_04829Not AvailablePositive5763481 - 576423927819.5

Displaying genes 4811 – 4820 of 5647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.