Pseudosphingobacterium domesticum strain DSM 18733

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Olivibacter

Description

Pseudosphingobacterium domesticum strain DSM 18733 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number FOAF00000000.1, facilitating its identification and study in microbiological research. As a member of the Pseudosphingobacterium genus, DSM 18733 contributes to the broader understanding of microbial diversity and functional capabilities within its ecological niches. While specific metabolic pathways or ecological roles of this strain are not detailed in the provided traits, the presence of a single replicon may suggest potential advantages in genomic stability and adaptability to various environments. In summary, Pseudosphingobacterium domesticum strain DSM 18733, with its single replicon and specific genomic identification, underscores the importance of microbial strains in understanding ecological interactions and evolutionary adaptations in their respective habitats. Further exploration of its physiological properties and interactions could provide deeper insights into its role in the environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusOlivibacter
SpeciesOlivibacter domesticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudosphingobacterium domesticum strain DSM 18733 genome

Gene Summary

Adenine Count

2060102 bp

Thymine Count

2079423 bp

Guanine Count

1274645 bp

Cytosine Count

1365528 bp

Genome Length

6780495 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anhydro-n-acetylmuramic acid kinaseSAMN05661044_02733Not AvailableNegative3157916 - 315911843849.6
tonb-dependent outer membrane receptor, susc/raga subfamily, signature regionSAMN05661044_02734Not AvailableNegative3159261 - 3165437234161.0
repeat domain-containing proteinSAMN05661044_02735Not AvailableNegative3165585 - 316684746388.3
drug resistance transporter, bcr/cfla subfamilySAMN05661044_02736Not AvailableNegative3166904 - 316814845965.5
hypothetical proteinSAMN05661044_02737Not AvailableNegative3168369 - 31684884447.58
phosphate transport system atp-binding proteinSAMN05661044_02738Not AvailableNegative3168518 - 316927928152.3
phosphate transport system permease proteinSAMN05661044_02739Not AvailableNegative3169276 - 317011830373.5
phosphate transport system permease proteinSAMN05661044_02740Not AvailableNegative3170111 - 317100132503.5
phosphate transport system substrate-binding proteinSAMN05661044_02741Not AvailableNegative3170998 - 317195735265.2
hypothetical proteinSAMN05661044_02742Not AvailableNegative3171974 - 31721115070.72

Displaying genes 2731 – 2740 of 5647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.