Pseudosphingobacterium domesticum strain DSM 18733

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Olivibacter

Description

Pseudosphingobacterium domesticum strain DSM 18733 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number FOAF00000000.1, facilitating its identification and study in microbiological research. As a member of the Pseudosphingobacterium genus, DSM 18733 contributes to the broader understanding of microbial diversity and functional capabilities within its ecological niches. While specific metabolic pathways or ecological roles of this strain are not detailed in the provided traits, the presence of a single replicon may suggest potential advantages in genomic stability and adaptability to various environments. In summary, Pseudosphingobacterium domesticum strain DSM 18733, with its single replicon and specific genomic identification, underscores the importance of microbial strains in understanding ecological interactions and evolutionary adaptations in their respective habitats. Further exploration of its physiological properties and interactions could provide deeper insights into its role in the environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusOlivibacter
SpeciesOlivibacter domesticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudosphingobacterium domesticum strain DSM 18733 genome

Gene Summary

Adenine Count

2060102 bp

Thymine Count

2079423 bp

Guanine Count

1274645 bp

Cytosine Count

1365528 bp

Genome Length

6780495 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, hxlr familySAMN05661044_01852Not AvailablePositive2060785 - 206120416626.4
outer membrane protein beta-barrel domain-containing proteinSAMN05661044_01853Not AvailablePositive2061359 - 206199123811.9
2'-5' rna ligaseSAMN05661044_01854Not AvailableNegative2062005 - 206258022199.1
protein of unknown functionSAMN05661044_01855Not AvailablePositive2063044 - 206386531363.0
abc-2 type transport system permease proteinSAMN05661044_01856Not AvailableNegative2063886 - 206501042557.7
abc-2 type transport system permease proteinSAMN05661044_01857Not AvailableNegative2065036 - 206614541445.3
abc-2 type transport system atp-binding proteinSAMN05661044_01858Not AvailableNegative2066220 - 206696628043.9
abc-type multidrug transport system, atpase componentSAMN05661044_01859Not AvailableNegative2066988 - 206792034823.3
hlyd family secretion proteinSAMN05661044_01860Not AvailableNegative2067940 - 206885433952.8
outer membrane protein tolcSAMN05661044_01861Not AvailableNegative2068883 - 207024451695.3

Displaying genes 1851 – 1860 of 5647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.