Pseudosphingobacterium domesticum strain DSM 18733

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Olivibacter

Description

Pseudosphingobacterium domesticum strain DSM 18733 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number FOAF00000000.1, facilitating its identification and study in microbiological research. As a member of the Pseudosphingobacterium genus, DSM 18733 contributes to the broader understanding of microbial diversity and functional capabilities within its ecological niches. While specific metabolic pathways or ecological roles of this strain are not detailed in the provided traits, the presence of a single replicon may suggest potential advantages in genomic stability and adaptability to various environments. In summary, Pseudosphingobacterium domesticum strain DSM 18733, with its single replicon and specific genomic identification, underscores the importance of microbial strains in understanding ecological interactions and evolutionary adaptations in their respective habitats. Further exploration of its physiological properties and interactions could provide deeper insights into its role in the environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusOlivibacter
SpeciesOlivibacter domesticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudosphingobacterium domesticum strain DSM 18733 genome

Gene Summary

Adenine Count

2060102 bp

Thymine Count

2079423 bp

Guanine Count

1274645 bp

Cytosine Count

1365528 bp

Genome Length

6780495 bp

Protein-coding Genes

5599 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing proteinSAMN05661044_01522Not AvailablePositive1685189 - 168666154666.6
histidine kinase-, dna gyrase b-, and hsp90-like atpaseSAMN05661044_01523Not AvailablePositive1686669 - 168718419431.4
response regulator receiver domain-containing proteinSAMN05661044_01524Not AvailableNegative1687333 - 168769513396.5
hsp20 family proteinSAMN05661044_01525Not AvailableNegative1688130 - 168858217096.1
glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferaseSAMN05661044_01526Not AvailableNegative1688947 - 168937216062.2
arac-type dna-binding proteinSAMN05661044_01527Not AvailableNegative1689454 - 169022129629.9
multimeric flavodoxin wrbaSAMN05661044_01528Not AvailablePositive1690492 - 169107621303.7
hypothetical proteinSAMN05661044_01529Not AvailablePositive1691130 - 169191529637.0
hypothetical proteinSAMN05661044_01530Not AvailablePositive1692606 - 16927646099.45
protein n-acetyltransferase, rimj/riml familySAMN05661044_01531Not AvailablePositive1693361 - 169384618475.0

Displaying genes 1521 – 1530 of 5647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.