Pseudomonas sp. NFACC41-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC41-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of this strain is represented by the accession number FOAE00000000.1, which allows for further investigation and comparison with other Pseudomonas species and strains. The presence of a single replicon suggests that Pseudomonas sp. NFACC41-3 may possess efficient replication and regulation mechanisms, which could enhance its survival capabilities in diverse ecological niches. Pseudomonas species are commonly known for their metabolic versatility, enabling them to thrive in various environments, including soil, water, and plant surfaces. Additionally, the genomic simplicity of having just one replicon may facilitate quicker responses to environmental changes, potentially allowing Pseudomonas sp. NFACC41-3 to exploit available resources more effectively than those with more complex genomic structures. This trait could be particularly advantageous in competitive environments, where rapid adaptability is crucial for survival. In conclusion, the genomic features of Pseudomonas sp. NFACC41-3, highlighted by its single replicon, suggest a potential for ecological resilience and adaptability. This could enable the strain to play a significant role in nutrient cycling and interactions within its habitat, contributing to the overall dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC41-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC41-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC41-3 genome assembly, contig:

Gene Summary

Adenine Count

1187364 bp

Thymine Count

1210006 bp

Guanine Count

2064326 bp

Cytosine Count

2026923 bp

Genome Length

6492581 bp

Protein-coding Genes

5715 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinasesSAMN03159414_5085Not AvailablePositive5538634 - 553932625846.8
rna polymerase sigma-70 factor, ecf subfamilySAMN03159414_5086Not AvailablePositive5539416 - 553994620697.2
killing trait domain-containing proteinSAMN03159414_5087Not AvailablePositive5540066 - 55402937788.29
hypothetical proteinSAMN03159414_5088Not AvailablePositive5540312 - 554101924039.2
hypothetical proteinSAMN03159414_5089Not AvailablePositive5541112 - 554157617297.5
killing trait domain-containing proteinSAMN03159414_5090Not AvailablePositive5541662 - 554197610819.8
killing trait domain-containing proteinSAMN03159414_5091Not AvailablePositive5542027 - 554233810611.6
glutarate-semialdehyde dehydrogenase /succinate semialdehyde dehydrogenaseSAMN03159414_5092Not AvailablePositive5542794 - 554423651518.1
5-aminovalerate transaminaseSAMN03159414_5094Not AvailablePositive5544425 - 554570244881.6
hd-like signal output (hdod) domain, no enzymatic activitySAMN03159414_5095Not AvailablePositive5545842 - 554707144984.4

Displaying genes 4951 – 4960 of 5816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.