Pseudomonas sp. NFACC41-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC41-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of this strain is represented by the accession number FOAE00000000.1, which allows for further investigation and comparison with other Pseudomonas species and strains. The presence of a single replicon suggests that Pseudomonas sp. NFACC41-3 may possess efficient replication and regulation mechanisms, which could enhance its survival capabilities in diverse ecological niches. Pseudomonas species are commonly known for their metabolic versatility, enabling them to thrive in various environments, including soil, water, and plant surfaces. Additionally, the genomic simplicity of having just one replicon may facilitate quicker responses to environmental changes, potentially allowing Pseudomonas sp. NFACC41-3 to exploit available resources more effectively than those with more complex genomic structures. This trait could be particularly advantageous in competitive environments, where rapid adaptability is crucial for survival. In conclusion, the genomic features of Pseudomonas sp. NFACC41-3, highlighted by its single replicon, suggest a potential for ecological resilience and adaptability. This could enable the strain to play a significant role in nutrient cycling and interactions within its habitat, contributing to the overall dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC41-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC41-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC41-3 genome assembly, contig:

Gene Summary

Adenine Count

1187364 bp

Thymine Count

1210006 bp

Guanine Count

2064326 bp

Cytosine Count

2026923 bp

Genome Length

6492581 bp

Protein-coding Genes

5715 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein ompaSAMN03159414_4388Not AvailableNegative4676392 - 467689517924.6
diguanylate cyclase (ggdef) domain-containing proteinSAMN03159414_4389Not AvailableNegative4676900 - 467816845298.7
protein of unknown functionSAMN03159414_4390Not AvailableNegative4678165 - 467874320669.9
isopenicillin n synthaseSAMN03159414_4392Not AvailablePositive4679934 - 468099238994.4
polar amino acid transport system substrate-binding proteinSAMN03159414_4393Not AvailablePositive4681036 - 468183328448.1
polar amino acid transport system permease proteinSAMN03159414_4394Not AvailablePositive4681931 - 468347256502.2
dna helicase/exodeoxyribonuclease v, alpha subunitSAMN03159414_4395Not AvailableNegative4683502 - 468557175682.1
dna helicase/exodeoxyribonuclease v, beta subunitSAMN03159414_4396Not AvailableNegative4685568 - 4689260137562.0
dna helicase/exodeoxyribonuclease v, gamma subunitSAMN03159414_4397Not AvailableNegative4689257 - 4692709129853.0
t1ss-143 domain-containing proteinSAMN03159414_4401Not AvailablePositive4693178 - 4698625179683.0

Displaying genes 4281 – 4290 of 5816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.