Pseudomonas sp. NFACC41-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC41-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of this strain is represented by the accession number FOAE00000000.1, which allows for further investigation and comparison with other Pseudomonas species and strains. The presence of a single replicon suggests that Pseudomonas sp. NFACC41-3 may possess efficient replication and regulation mechanisms, which could enhance its survival capabilities in diverse ecological niches. Pseudomonas species are commonly known for their metabolic versatility, enabling them to thrive in various environments, including soil, water, and plant surfaces. Additionally, the genomic simplicity of having just one replicon may facilitate quicker responses to environmental changes, potentially allowing Pseudomonas sp. NFACC41-3 to exploit available resources more effectively than those with more complex genomic structures. This trait could be particularly advantageous in competitive environments, where rapid adaptability is crucial for survival. In conclusion, the genomic features of Pseudomonas sp. NFACC41-3, highlighted by its single replicon, suggest a potential for ecological resilience and adaptability. This could enable the strain to play a significant role in nutrient cycling and interactions within its habitat, contributing to the overall dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC41-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC41-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC41-3 genome assembly, contig:

Gene Summary

Adenine Count

1187364 bp

Thymine Count

1210006 bp

Guanine Count

2064326 bp

Cytosine Count

2026923 bp

Genome Length

6492581 bp

Protein-coding Genes

5715 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospholipid/cholesterol/gamma-hch transport system atp-binding proteinSAMN03159414_4209Not AvailableNegative4478398 - 447920729372.9
arabinose-5-phosphate isomeraseSAMN03159414_4210Not AvailablePositive4479483 - 448045734476.9
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)SAMN03159414_4211Not AvailablePositive4480457 - 448098118795.8
lipopolysaccharide export system protein lptcSAMN03159414_4212Not AvailablePositive4480990 - 448156221594.9
lipopolysaccharide export system protein lptaSAMN03159414_4213Not AvailablePositive4481549 - 448209719682.5
lipopolysaccharide export system atp-binding proteinSAMN03159414_4214Not AvailablePositive4482097 - 448282226553.2
rna polymerase, sigma 54 subunit, rpon/siglSAMN03159414_4215Not AvailablePositive4483029 - 448449855673.6
sigma 54 modulation proteinSAMN03159414_4216Not AvailablePositive4484578 - 448488311572.0
pts iia-like nitrogen-regulatory protein ptsnSAMN03159414_4217Not AvailablePositive4484896 - 448536016829.4
upf0042 nucleotide-binding proteinSAMN03159414_4218Not AvailablePositive4485363 - 448622032113.4

Displaying genes 4111 – 4120 of 5816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.