Pseudomonas sp. NFACC41-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC41-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of this strain is represented by the accession number FOAE00000000.1, which allows for further investigation and comparison with other Pseudomonas species and strains. The presence of a single replicon suggests that Pseudomonas sp. NFACC41-3 may possess efficient replication and regulation mechanisms, which could enhance its survival capabilities in diverse ecological niches. Pseudomonas species are commonly known for their metabolic versatility, enabling them to thrive in various environments, including soil, water, and plant surfaces. Additionally, the genomic simplicity of having just one replicon may facilitate quicker responses to environmental changes, potentially allowing Pseudomonas sp. NFACC41-3 to exploit available resources more effectively than those with more complex genomic structures. This trait could be particularly advantageous in competitive environments, where rapid adaptability is crucial for survival. In conclusion, the genomic features of Pseudomonas sp. NFACC41-3, highlighted by its single replicon, suggest a potential for ecological resilience and adaptability. This could enable the strain to play a significant role in nutrient cycling and interactions within its habitat, contributing to the overall dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC41-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC41-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC41-3 genome assembly, contig:

Gene Summary

Adenine Count

1187364 bp

Thymine Count

1210006 bp

Guanine Count

2064326 bp

Cytosine Count

2026923 bp

Genome Length

6492581 bp

Protein-coding Genes

5715 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
erythromycin esterase homologSAMN03159414_1478Not AvailablePositive1606927 - 160826149811.4
hypothetical proteinSAMN03159414_1479Not AvailablePositive1608304 - 16085227616.33
phytanoyl-coa dioxygenase (phyh)SAMN03159414_1480Not AvailableNegative1608543 - 160940932141.8
arac-type dna-binding proteinSAMN03159414_1481Not AvailablePositive1609488 - 161051037807.2
lipase (class 3)SAMN03159414_1482Not AvailableNegative1610716 - 161290281474.9
hypothetical proteinSAMN03159414_1483Not AvailableNegative1612915 - 161369129334.0
protein of unknown functionSAMN03159414_1484Not AvailableNegative1613691 - 161454532331.9
type vi secretion system secreted protein vgrgSAMN03159414_1485Not AvailableNegative1614542 - 161661776809.4
small-conductance mechanosensitive channelSAMN03159414_1486Not AvailablePositive1616972 - 161938986935.0
diguanylate cyclase (ggdef) domain-containing proteinSAMN03159414_1487Not AvailablePositive1619559 - 162108256376.2

Displaying genes 1491 – 1500 of 5816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.