Pseudomonas sp. NFACC41-3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. NFACC41-3 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of this strain is represented by the accession number FOAE00000000.1, which allows for further investigation and comparison with other Pseudomonas species and strains. The presence of a single replicon suggests that Pseudomonas sp. NFACC41-3 may possess efficient replication and regulation mechanisms, which could enhance its survival capabilities in diverse ecological niches. Pseudomonas species are commonly known for their metabolic versatility, enabling them to thrive in various environments, including soil, water, and plant surfaces. Additionally, the genomic simplicity of having just one replicon may facilitate quicker responses to environmental changes, potentially allowing Pseudomonas sp. NFACC41-3 to exploit available resources more effectively than those with more complex genomic structures. This trait could be particularly advantageous in competitive environments, where rapid adaptability is crucial for survival. In conclusion, the genomic features of Pseudomonas sp. NFACC41-3, highlighted by its single replicon, suggest a potential for ecological resilience and adaptability. This could enable the strain to play a significant role in nutrient cycling and interactions within its habitat, contributing to the overall dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. NFACC41-3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. NFACC41-3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. NFACC41-3 genome assembly, contig:

Gene Summary

Adenine Count

1187364 bp

Thymine Count

1210006 bp

Guanine Count

2064326 bp

Cytosine Count

2026923 bp

Genome Length

6492581 bp

Protein-coding Genes

5715 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of unknown functionSAMN03159414_1264Not AvailablePositive1360666 - 136133724263.2
hypothetical proteinSAMN03159414_1265Not AvailablePositive1361708 - 136205212767.7
thiol peroxidase (atypical 2-cys peroxiredoxin)SAMN03159414_1266Not AvailablePositive1362339 - 136283917355.8
membrane fusion protein, multidrug efflux systemSAMN03159414_1267Not AvailablePositive1363015 - 136433146751.5
multidrug efflux pumpSAMN03159414_1268Not AvailablePositive1364328 - 1367432111474.0
multidrug efflux pumpSAMN03159414_1269Not AvailablePositive1367429 - 1370536112411.0
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN03159414_1270Not AvailablePositive1370533 - 137201153404.9
diguanylate cyclase (ggdef) domain-containing proteinSAMN03159414_1271Not AvailablePositive1372282 - 137436074762.0
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN03159414_1272Not AvailablePositive1374758 - 137550426106.3
dna-binding transcriptional regulator, mocr family, contains an aminotransferase domainSAMN03159414_1273Not AvailableNegative1375947 - 137735651994.0

Displaying genes 1281 – 1290 of 5816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.