Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Aquimarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Aquimarina |
| Species | Aquimarina amphilecti |
| Strain | strain DSM 25232 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802876 bp
Thymine Count
1808296 bp
Guanine Count
855474 bp
Cytosine Count
841061 bp
Genome Length
5309872 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487910_0724 | Not Available | Positive | 810019 - 810570 | 21136.4 |
| hypothetical protein | SAMN04487910_0725 | Not Available | Positive | 810567 - 811130 | 21371.8 |
| duf4097 and duf4098 domain-containing protein yvlb | SAMN04487910_0726 | Not Available | Positive | 811111 - 812211 | 40600.5 |
| putative auto-transporter adhesin, head gin domain | SAMN04487910_0727 | Not Available | Positive | 812231 - 812965 | 26096.9 |
| tyrosine-protein phosphatase ywqe | SAMN04487910_0728 | Not Available | Positive | 813143 - 813877 | 28240.2 |
| capsular exopolysaccharide family | SAMN04487910_0729 | Not Available | Negative | 813874 - 816237 | 88233.6 |
| polysaccharide export outer membrane protein | SAMN04487910_0730 | Not Available | Negative | 816245 - 817036 | 28722.9 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04487910_0731 | Not Available | Negative | 817120 - 819048 | 72095.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04487910_0732 | Not Available | Negative | 819045 - 820181 | 42012.1 |
| hypothetical protein | SAMN04487910_0733 | Not Available | Negative | 820435 - 820560 | 4852.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
