Aquimarina amphilecti strain DSM 25232

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina amphilecti strain DSM 25232 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species belongs to the genus Aquimarina, which is known for its presence in marine environments. The strain has a notable genetic characteristic, exhibiting a single replicon, which is a feature that can influence its replication and genomic stability. The genome of Aquimarina amphilecti strain DSM 25232 is documented under the accession number FOAB00000000.1, providing a resource for further genomic studies and comparative analysis with related species within the genus. The ecological significance of Aquimarina amphilecti may be connected to its marine habitat, where it could play a role in nutrient cycling and interactions with other microbial entities. Understanding the traits of this strain can inform research on marine microbiomes and the ecological functions they perform, highlighting the intricate relationships within these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina amphilecti
Strainstrain DSM 25232

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina amphilecti strain DSM 25232 genome assembly, contig:

Gene Summary

Adenine Count

1802876 bp

Thymine Count

1808296 bp

Guanine Count

855474 bp

Cytosine Count

841061 bp

Genome Length

5309872 bp

Protein-coding Genes

4647 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ste24 endopeptidaseSAMN04487910_4690Not AvailableNegative5255158 - 525639046577.4
rna methyltransferase, trmh familySAMN04487910_4691Not AvailableNegative5256450 - 525731632149.8
lsu ribosomal protein l20pSAMN04487910_4692Not AvailableNegative5257519 - 525786313228.3
lsu ribosomal protein l35pSAMN04487910_4693Not AvailableNegative5258002 - 52581997542.55
bacterial translation initiation factor 3 (bif-3)SAMN04487910_4694Not AvailableNegative5258256 - 525873818553.0
threonyl-trna synthetaseSAMN04487910_4695Not AvailableNegative5258849 - 526079573852.9
carboxypepd_reg-like domain-containing proteinSAMN04487910_4696Not AvailableNegative5261412 - 526181914542.1
transcriptional regulator, gntr familySAMN04487910_4697Not AvailableNegative5262105 - 526280926559.1
putative meta-pathway of phenol degradationSAMN04487910_4698Not AvailableNegative5263047 - 526474166425.8
protein of unknown functionSAMN04487910_4699Not AvailablePositive5264803 - 526507210268.5

Displaying genes 4661 – 4670 of 4703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.