Aquimarina amphilecti strain DSM 25232

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina amphilecti strain DSM 25232 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species belongs to the genus Aquimarina, which is known for its presence in marine environments. The strain has a notable genetic characteristic, exhibiting a single replicon, which is a feature that can influence its replication and genomic stability. The genome of Aquimarina amphilecti strain DSM 25232 is documented under the accession number FOAB00000000.1, providing a resource for further genomic studies and comparative analysis with related species within the genus. The ecological significance of Aquimarina amphilecti may be connected to its marine habitat, where it could play a role in nutrient cycling and interactions with other microbial entities. Understanding the traits of this strain can inform research on marine microbiomes and the ecological functions they perform, highlighting the intricate relationships within these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina amphilecti
Strainstrain DSM 25232

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina amphilecti strain DSM 25232 genome assembly, contig:

Gene Summary

Adenine Count

1802876 bp

Thymine Count

1808296 bp

Guanine Count

855474 bp

Cytosine Count

841061 bp

Genome Length

5309872 bp

Protein-coding Genes

4647 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endoglucanaseSAMN04487910_4538Not AvailablePositive5079031 - 508015542008.6
acetyl-coenzyme a synthetaseSAMN04487910_4539Not AvailableNegative5080205 - 508211271865.6
response regulator receiver domain-containing proteinSAMN04487910_4540Not AvailableNegative5082250 - 508261513911.1
na+/proline symporterSAMN04487910_4541Not AvailableNegative5082681 - 5085386101430.0
cation/acetate symporterSAMN04487910_4542Not AvailableNegative5085645 - 508743563889.4
putative solute:sodium symporter small subunitSAMN04487910_4543Not AvailableNegative5087588 - 508785110327.9
short chain amide porinSAMN04487910_4544Not AvailableNegative5087863 - 508909545331.1
homeodomain-like domain-containing proteinSAMN04487910_4545Not AvailableNegative5089206 - 508962516572.0
isopentenyldiphosphate isomeraseSAMN04487910_4546Not AvailablePositive5089779 - 509033321524.6
starvation-inducible dna-binding proteinSAMN04487910_4547Not AvailablePositive5090428 - 509088017531.9

Displaying genes 4511 – 4520 of 4703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.