Aquimarina amphilecti strain DSM 25232

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina amphilecti strain DSM 25232 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species belongs to the genus Aquimarina, which is known for its presence in marine environments. The strain has a notable genetic characteristic, exhibiting a single replicon, which is a feature that can influence its replication and genomic stability. The genome of Aquimarina amphilecti strain DSM 25232 is documented under the accession number FOAB00000000.1, providing a resource for further genomic studies and comparative analysis with related species within the genus. The ecological significance of Aquimarina amphilecti may be connected to its marine habitat, where it could play a role in nutrient cycling and interactions with other microbial entities. Understanding the traits of this strain can inform research on marine microbiomes and the ecological functions they perform, highlighting the intricate relationships within these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina amphilecti
Strainstrain DSM 25232

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina amphilecti strain DSM 25232 genome assembly, contig:

Gene Summary

Adenine Count

1802876 bp

Thymine Count

1808296 bp

Guanine Count

855474 bp

Cytosine Count

841061 bp

Genome Length

5309872 bp

Protein-coding Genes

4647 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04487910_4398Not AvailablePositive4930863 - 493142921038.2
mannose-6-phosphate isomerase, cupin superfamilySAMN04487910_4399Not AvailablePositive4931450 - 493181814064.7
pimeloyl-acp methyl ester carboxylesteraseSAMN04487910_4400Not AvailablePositive4931815 - 493265432446.3
ribosomal large subunit pseudouridine synthase fSAMN04487910_4401Not AvailablePositive4932677 - 493354633471.3
hypothetical proteinSAMN04487910_4402Not AvailablePositive4933607 - 493403216417.4
sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilySAMN04487910_4403Not AvailablePositive4934179 - 493512036933.6
aldehyde dehydrogenase (nad+)SAMN04487910_4404Not AvailablePositive4935151 - 493651551062.3
kynurenine 3-monooxygenaseSAMN04487910_4405Not AvailableNegative4936526 - 493788151949.6
methyltransferase domain-containing proteinSAMN04487910_4406Not AvailableNegative4938028 - 493882830574.4
cyclic nucleotide-binding domain-containing proteinSAMN04487910_4407Not AvailablePositive4939015 - 494040352727.7

Displaying genes 4371 – 4380 of 4703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.