Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Aquimarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Aquimarina |
| Species | Aquimarina amphilecti |
| Strain | strain DSM 25232 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802876 bp
Thymine Count
1808296 bp
Guanine Count
855474 bp
Cytosine Count
841061 bp
Genome Length
5309872 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase-1 | SAMN04487910_4025 | Not Available | Positive | 4520152 - 4521780 | 62788.2 |
| atp dependent helicase, lhr family | SAMN04487910_4026 | Not Available | Positive | 4521777 - 4524245 | 94386.3 |
| putative phosphoesterase | SAMN04487910_4027 | Not Available | Positive | 4524253 - 4524891 | 24455.1 |
| carboxypepd_reg-like domain-containing protein | SAMN04487910_4028 | Not Available | Negative | 4524961 - 4527336 | 91294.8 |
| selenocysteine lyase/cysteine desulfurase | SAMN04487910_4029 | Not Available | Positive | 4527494 - 4528636 | 43317.9 |
| transcription-repair coupling factor | SAMN04487910_4030 | Not Available | Positive | 4528704 - 4532069 | 128381.0 |
| hypothetical protein | SAMN04487910_4031 | Not Available | Positive | 4532251 - 4532562 | 12396.7 |
| helix-turn-helix | SAMN04487910_4032 | Not Available | Positive | 4532828 - 4533739 | 34248.5 |
| cubico group peptidase, beta-lactamase class c family | SAMN04487910_4033 | Not Available | Positive | 4533826 - 4535025 | 44899.7 |
| hypothetical protein | SAMN04487910_4034 | Not Available | Negative | 4535198 - 4535368 | 5968.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
