Aquimarina amphilecti strain DSM 25232

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina amphilecti strain DSM 25232 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species belongs to the genus Aquimarina, which is known for its presence in marine environments. The strain has a notable genetic characteristic, exhibiting a single replicon, which is a feature that can influence its replication and genomic stability. The genome of Aquimarina amphilecti strain DSM 25232 is documented under the accession number FOAB00000000.1, providing a resource for further genomic studies and comparative analysis with related species within the genus. The ecological significance of Aquimarina amphilecti may be connected to its marine habitat, where it could play a role in nutrient cycling and interactions with other microbial entities. Understanding the traits of this strain can inform research on marine microbiomes and the ecological functions they perform, highlighting the intricate relationships within these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina amphilecti
Strainstrain DSM 25232

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina amphilecti strain DSM 25232 genome assembly, contig:

Gene Summary

Adenine Count

1802876 bp

Thymine Count

1808296 bp

Guanine Count

855474 bp

Cytosine Count

841061 bp

Genome Length

5309872 bp

Protein-coding Genes

4647 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
right handed beta helix regionSAMN04487910_3954Not AvailableNegative4430610 - 443228063619.4
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04487910_3955Not AvailablePositive4432731 - 443356129297.3
d-mannonate dehydrataseSAMN04487910_3956Not AvailablePositive4433572 - 443475644878.1
4-deoxy-l-threo-5-hexosulose-uronate ketol-isomeraseSAMN04487910_3957Not AvailablePositive4434775 - 443561431560.5
gluconate 5-dehydrogenaseSAMN04487910_3958Not AvailablePositive4435623 - 443641728466.4
protein of unknown functionSAMN04487910_3959Not AvailablePositive4436417 - 443765846791.7
2-dehydro-3-deoxygluconokinaseSAMN04487910_3960Not AvailablePositive4437655 - 443865037117.2
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN04487910_3961Not AvailablePositive4438651 - 443931624575.1
tripartite atp-independent transporter solute receptor, dctp familySAMN04487910_3962Not AvailablePositive4439321 - 444030136916.7
trap-type c4-dicarboxylate transport system, small permease componentSAMN04487910_3963Not AvailablePositive4440298 - 444076517486.3

Displaying genes 3931 – 3940 of 4703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.