Aquimarina amphilecti strain DSM 25232

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina amphilecti strain DSM 25232 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species belongs to the genus Aquimarina, which is known for its presence in marine environments. The strain has a notable genetic characteristic, exhibiting a single replicon, which is a feature that can influence its replication and genomic stability. The genome of Aquimarina amphilecti strain DSM 25232 is documented under the accession number FOAB00000000.1, providing a resource for further genomic studies and comparative analysis with related species within the genus. The ecological significance of Aquimarina amphilecti may be connected to its marine habitat, where it could play a role in nutrient cycling and interactions with other microbial entities. Understanding the traits of this strain can inform research on marine microbiomes and the ecological functions they perform, highlighting the intricate relationships within these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina amphilecti
Strainstrain DSM 25232

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina amphilecti strain DSM 25232 genome assembly, contig:

Gene Summary

Adenine Count

1802876 bp

Thymine Count

1808296 bp

Guanine Count

855474 bp

Cytosine Count

841061 bp

Genome Length

5309872 bp

Protein-coding Genes

4647 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)SAMN04487910_3933Not AvailableNegative4400547 - 440215456928.7
pyruvate dehydrogenase e1 component alpha subunitSAMN04487910_3934Not AvailableNegative4402158 - 440315937591.1
cytidine deaminaseSAMN04487910_3935Not AvailableNegative4403318 - 440380017742.5
long-chain fatty acid transport proteinSAMN04487910_3936Not AvailableNegative4403928 - 440508842623.5
por secretion system c-terminal sorting domain-containing proteinSAMN04487910_3937Not AvailableNegative4405128 - 4409003143765.0
protein involved in gliding motility gldjSAMN04487910_3938Not AvailablePositive4409178 - 441085164072.3
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseSAMN04487910_3939Not AvailablePositive4410926 - 441220647860.4
protein of unknown functionSAMN04487910_3940Not AvailableNegative4412222 - 441329841240.5
small conductance mechanosensitive channelSAMN04487910_3941Not AvailableNegative4413436 - 441426930892.6
Trna-valNot AvailableNot AvailablePositive4414373 - 4414450Not Available

Displaying genes 3911 – 3920 of 4703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.