Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Aquimarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Aquimarina |
| Species | Aquimarina amphilecti |
| Strain | strain DSM 25232 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802876 bp
Thymine Count
1808296 bp
Guanine Count
855474 bp
Cytosine Count
841061 bp
Genome Length
5309872 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487910_3418 | Not Available | Positive | 3847233 - 3848165 | 35077.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487910_3419 | Not Available | Positive | 3848158 - 3848652 | 19332.7 |
| hypothetical protein | SAMN04487910_3420 | Not Available | Positive | 3848645 - 3849247 | 22877.4 |
| lipid a 3-o-deacylase (pagl) | SAMN04487910_3421 | Not Available | Negative | 3849260 - 3850342 | 40887.6 |
| hypothetical protein | SAMN04487910_3422 | Not Available | Positive | 3850503 - 3851255 | 27959.5 |
| hypothetical protein | SAMN04487910_3423 | Not Available | Positive | 3851627 - 3852511 | 34147.1 |
| dinb superfamily protein | SAMN04487910_3424 | Not Available | Positive | 3852960 - 3853469 | 20742.7 |
| pap2 superfamily protein | SAMN04487910_3425 | Not Available | Negative | 3853479 - 3854252 | 28906.7 |
| imp dehydrogenase | SAMN04487910_3426 | Not Available | Positive | 3854561 - 3856033 | 52228.2 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04487910_3427 | Not Available | Negative | 3856115 - 3856621 | 18828.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
