Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Aquimarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Aquimarina |
| Species | Aquimarina amphilecti |
| Strain | strain DSM 25232 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802876 bp
Thymine Count
1808296 bp
Guanine Count
855474 bp
Cytosine Count
841061 bp
Genome Length
5309872 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487910_3064 | Not Available | Positive | 3449170 - 3449718 | 20477.8 |
| 3-oxoadipyl-coa thiolase | SAMN04487910_3065 | Not Available | Positive | 3449725 - 3450936 | 43391.8 |
| oxepin-coa hydrolase / 3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenase | SAMN04487910_3066 | Not Available | Positive | 3450940 - 3453438 | 92725.4 |
| methylglutaconyl-coa hydratase | SAMN04487910_3067 | Not Available | Positive | 3453461 - 3454213 | 27188.6 |
| phenylacetic acid degradation protein | SAMN04487910_3068 | Not Available | Positive | 3454238 - 3454831 | 21705.3 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | SAMN04487910_3069 | Not Available | Positive | 3454911 - 3456227 | 48310.1 |
| branched-chain amino acid aminotransferase | SAMN04487910_3070 | Not Available | Positive | 3456302 - 3457375 | 39481.4 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN04487910_3071 | Not Available | Positive | 3457432 - 3459495 | 76493.5 |
| hypothetical protein | SAMN04487910_3072 | Not Available | Negative | 3459572 - 3459778 | 7003.58 |
| lipocalin-like domain-containing protein | SAMN04487910_3073 | Not Available | Positive | 3460765 - 3461190 | 15461.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
