Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Aquimarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Aquimarina |
| Species | Aquimarina amphilecti |
| Strain | strain DSM 25232 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802876 bp
Thymine Count
1808296 bp
Guanine Count
855474 bp
Cytosine Count
841061 bp
Genome Length
5309872 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487910_2963 | Not Available | Positive | 3314470 - 3315687 | 45204.2 |
| cellulase (glycosyl hydrolase family 5) | SAMN04487910_2964 | Not Available | Negative | 3315756 - 3317297 | 59821.4 |
| hypothetical protein | SAMN04487910_2965 | Not Available | Negative | 3317294 - 3318526 | 46082.1 |
| hypothetical protein | SAMN04487910_2966 | Not Available | Negative | 3318526 - 3321618 | 118865.0 |
| glycosyl transferase family 2 | SAMN04487910_2967 | Not Available | Positive | 3321821 - 3322384 | 21046.4 |
| mannose-6-phosphate isomerase, type 1 | SAMN04487910_2968 | Not Available | Positive | 3322581 - 3323549 | 36883.1 |
| 3-isopropylmalate dehydrogenase | SAMN04487910_2969 | Not Available | Negative | 3323661 - 3324719 | 38676.9 |
| d-citramalate synthase | SAMN04487910_2970 | Not Available | Negative | 3324746 - 3326269 | 56587.6 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN04487910_2972 | Not Available | Negative | 3326377 - 3326973 | 22455.4 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN04487910_2973 | Not Available | Negative | 3326994 - 3328391 | 50131.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
