Aquimarina amphilecti strain DSM 25232

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina amphilecti strain DSM 25232 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species belongs to the genus Aquimarina, which is known for its presence in marine environments. The strain has a notable genetic characteristic, exhibiting a single replicon, which is a feature that can influence its replication and genomic stability. The genome of Aquimarina amphilecti strain DSM 25232 is documented under the accession number FOAB00000000.1, providing a resource for further genomic studies and comparative analysis with related species within the genus. The ecological significance of Aquimarina amphilecti may be connected to its marine habitat, where it could play a role in nutrient cycling and interactions with other microbial entities. Understanding the traits of this strain can inform research on marine microbiomes and the ecological functions they perform, highlighting the intricate relationships within these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina amphilecti
Strainstrain DSM 25232

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina amphilecti strain DSM 25232 genome assembly, contig:

Gene Summary

Adenine Count

1802876 bp

Thymine Count

1808296 bp

Guanine Count

855474 bp

Cytosine Count

841061 bp

Genome Length

5309872 bp

Protein-coding Genes

4647 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinasesSAMN04487910_0270Not AvailablePositive313716 - 31428822589.2
butyryl-coa dehydrogenaseSAMN04487910_0271Not AvailablePositive314499 - 31631367448.1
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04487910_0272Not AvailablePositive316381 - 31715727259.2
acyl-coa dehydrogenaseSAMN04487910_0273Not AvailablePositive317226 - 31844045287.0
predicted kinase, aminoglycoside phosphotransferase (apt) familySAMN04487910_0274Not AvailablePositive318444 - 31949640460.2
transglutaminase-like superfamily proteinSAMN04487910_0275Not AvailablePositive319507 - 32014224342.2
hypothetical proteinSAMN04487910_0276Not AvailablePositive320154 - 32053714624.8
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04487910_0277Not AvailablePositive320564 - 32131926898.6
3,2-trans-enoyl-coa isomeraseSAMN04487910_0278Not AvailablePositive321353 - 32211728913.9
hypothetical proteinSAMN04487910_0279Not AvailablePositive322148 - 32315236781.6

Displaying genes 271 – 280 of 4703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.