Aquimarina amphilecti strain DSM 25232

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aquimarina

Description

Aquimarina amphilecti strain DSM 25232 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species belongs to the genus Aquimarina, which is known for its presence in marine environments. The strain has a notable genetic characteristic, exhibiting a single replicon, which is a feature that can influence its replication and genomic stability. The genome of Aquimarina amphilecti strain DSM 25232 is documented under the accession number FOAB00000000.1, providing a resource for further genomic studies and comparative analysis with related species within the genus. The ecological significance of Aquimarina amphilecti may be connected to its marine habitat, where it could play a role in nutrient cycling and interactions with other microbial entities. Understanding the traits of this strain can inform research on marine microbiomes and the ecological functions they perform, highlighting the intricate relationships within these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAquimarina
SpeciesAquimarina amphilecti
Strainstrain DSM 25232

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aquimarina amphilecti strain DSM 25232 genome assembly, contig:

Gene Summary

Adenine Count

1802876 bp

Thymine Count

1808296 bp

Guanine Count

855474 bp

Cytosine Count

841061 bp

Genome Length

5309872 bp

Protein-coding Genes

4647 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
doxx-like family proteinSAMN04487910_1267Not AvailablePositive1443766 - 144411313225.7
16s rrna (cytidine1402-2'-o)-methyltransferaseSAMN04487910_1268Not AvailablePositive1444117 - 144478824895.3
hopj type iii effector proteinSAMN04487910_1269Not AvailablePositive1444792 - 144513913082.3
hypothetical proteinSAMN04487910_1270Not AvailableNegative1445146 - 144546312170.8
peptidase m50b-likeSAMN04487910_1271Not AvailablePositive1445576 - 144624124993.3
hypothetical proteinSAMN04487910_1272Not AvailableNegative1446317 - 144664912298.7
hypothetical proteinSAMN04487910_1273Not AvailablePositive1447004 - 144780130628.8
hypothetical proteinSAMN04487910_1274Not AvailablePositive1447822 - 144847225186.6
signal transduction histidine kinaseSAMN04487910_1275Not AvailablePositive1448448 - 144922729593.3
two component transcriptional regulator, luxr familySAMN04487910_1276Not AvailablePositive1449261 - 144991424645.5

Displaying genes 1261 – 1270 of 4703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.