Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Aquimarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Aquimarina |
| Species | Aquimarina amphilecti |
| Strain | strain DSM 25232 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1802876 bp
Thymine Count
1808296 bp
Guanine Count
855474 bp
Cytosine Count
841061 bp
Genome Length
5309872 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN04487910_1217 | Not Available | Positive | 1371821 - 1372399 | 22050.6 |
| ribonuclease hi | SAMN04487910_1218 | Not Available | Positive | 1372402 - 1373037 | 23987.7 |
| carbohydrate binding domain-containing protein | SAMN04487910_1219 | Not Available | Negative | 1373135 - 1374205 | 39132.4 |
| carbohydrate binding domain-containing protein | SAMN04487910_1220 | Not Available | Negative | 1374447 - 1375523 | 39420.0 |
| sugar or nucleoside kinase, ribokinase family | SAMN04487910_1221 | Not Available | Positive | 1375807 - 1376736 | 34397.3 |
| amidophosphoribosyltransferase | SAMN04487910_1222 | Not Available | Positive | 1376842 - 1378740 | 71810.8 |
| superoxide dismutase, fe-mn family | SAMN04487910_1223 | Not Available | Negative | 1379008 - 1379616 | 22136.8 |
| atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains) | SAMN04487910_1224 | Not Available | Positive | 1379818 - 1382970 | 121471.0 |
| pd-(d/e)xk nuclease superfamily protein | SAMN04487910_1225 | Not Available | Positive | 1384723 - 1387458 | 105949.0 |
| hypothetical protein | SAMN04487910_1226 | Not Available | Positive | 1387461 - 1388309 | 32515.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
