Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (nad) | SAMN05518853_101902 | Not Available | Positive | 1001571 - 1002557 | 35147.4 |
| trans-aconitate 2-methyltransferase | SAMN05518853_101903 | Not Available | Positive | 1002572 - 1003363 | 29208.9 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05518853_101904 | Not Available | Positive | 1003360 - 1004358 | 35026.0 |
| hypothetical protein | SAMN05518853_101905 | Not Available | Positive | 1004393 - 1004962 | 20020.3 |
| aconitase | SAMN05518853_101906 | Not Available | Positive | 1005042 - 1007627 | 92439.1 |
| hypothetical protein | SAMN05518853_101907 | Not Available | Negative | 1007707 - 1008567 | 32027.0 |
| protein of unknown function | SAMN05518853_101908 | Not Available | Negative | 1008580 - 1008807 | 8176.59 |
| protein of unknown function | SAMN05518853_101909 | Not Available | Positive | 1008824 - 1009039 | 7925.13 |
| hypothetical protein | SAMN05518853_101910 | Not Available | Positive | 1009048 - 1009638 | 20746.9 |
| acyl-coa dehydrogenase | SAMN05518853_101911 | Not Available | Positive | 1009745 - 1012048 | 82687.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
